Pay employees by direct deposit

10 min · Intermediate · US edition

AcboBooks writes a NACHA (ACH) file of your employees' net pay that you upload in your bank's business portal. No money passes through AcboBooks. New bank accounts are checked first with a zero-dollar prenote.

In this lesson you will

  • Enter the ACH details your bank gives you
  • Add an employee's bank account
  • Send a prenote and mark the account verified
  • Create the direct-deposit file for a pay run

Before you start

Direct Deposit pay run in AcboBooks with a paycheck ready and the Create ACH file button

One-time setup

Step 1: Enter your bank's ACH details

Ask your bank to enable ACH origination for your business account. Then open Company → Company Settings and fill in the Direct Deposit panel with what the bank gives you. Click Save Direct Deposit Settings.

  1. Company ID / immediate origin (10): from your bank, often 1 followed by your EIN.
  2. Bank's routing number (9 digits): the routing number the bank wants in the file header. AcboBooks checks the digits.
  3. Name on employees' statements: up to 16 characters.
  4. Save Direct Deposit Settings. The panel then shows set up.
Direct Deposit panel in Company Settings with a company ID, routing number and statement name
Tip: Import the Federal Reserve's free FedACH routing directory once (buttons in the same panel) and every routing number you type shows its bank name. The lookup is offline.

Step 2: Add the employee's bank account

In Payroll → Employees click Edit on the employee. Under Direct deposit enter the routing number, account number and account type from a void check or the bank's direct-deposit form. Click Save Changes.

  1. Routing number: 9 digits, checked as you type.
  2. Account number: 4 to 17 digits.
  3. Account type: Checking or Savings.
Edit Employee window with routing number, account number and account type under Direct deposit

Verify the account with a prenote

Step 3: Send a prenote

Open Payroll → Direct Deposit. New or changed accounts are listed under New or changed bank accounts — prenote. Tick the employee and click Create prenote file, save the file and upload it in your bank's portal. The employee stays on check until the account is verified.

  1. The employee whose account needs a prenote.
  2. Create prenote file for 1 account writes the zero-dollar file.
Prenote section listing Maria Santos with Not sent yet and the Create prenote file button

Step 4: Mark the account verified

Wait about three banking days. If the bank reports no return, click Bank confirmed — mark verified. From now on the employee's paychecks can go in a direct-deposit file.

  1. Bank confirmed — mark verified moves the employee to direct deposit.
Prenote sent status with the Bank confirmed — mark verified button

Pay a payroll by direct deposit

Step 5: Create the ACH file

After you run payroll, open Payroll → Direct Deposit. Pay run lists paychecks not yet deposited. Employees without a verified account are left out and paid by check. Set the deposit date, tick the confirmation, and click Create ACH file. AcboBooks saves the file, reads it back and compares every line before it is recorded.

  1. A paycheck marked Ready for a verified account.
  2. Effective (deposit) date: a banking day, usually one or two days after you upload.
  3. The confirmation that you checked the names, account endings and amounts, and that the money is in the account.
  4. Create ACH file saves the NACHA file to upload in your bank's portal.
Pay run list with Maria Santos ready, the effective date, the confirmation box and the Create ACH file button
Careful: Review the list again in your bank's portal before you approve the upload. If you edit or void a paycheck after the file was made, the file list flags it: create a fresh file instead of uploading the old one.

Recap

  • Your bank's ACH details are in Company Settings.
  • You can add an employee's account and verify it with a prenote.
  • You can create the NACHA file for a pay run and upload it to your bank.
Saved in this browser only. No account needed.

Questions

Does AcboBooks send the money?

No. It writes the file; you upload it in your bank's business portal and the bank releases the money.

Can I skip the prenote?

No. AcboBooks only puts verified accounts in a payment file, so a typo in an account number cannot send pay to the wrong place unnoticed.

Screenshots from AcboBooks 0.2.2 with the built-in sample company. Updated October 25, 2026. Your screens may differ slightly with another version or window size.

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